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    • Top cofit genes for GFF2021 from Sphingobium sp. HT1-2

    Ku domain protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5109 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) no 0.79
    2 GFF1283 Iron-sulfur cluster assembly scaffold protein IscU no 0.77
    3 GFF5148 Cation transport protein no 0.77
    4 GFF3124 hypothetical protein no 0.74
    5 GFF315 pyridoxal-phosphate dependent enzyme family protein no 0.72
    6 GFF4233 hypothetical protein no 0.70
    7 GFF32 hypothetical protein no 0.69
    8 GFF1761 hypothetical protein no 0.69
    9 GFF2091 hypothetical protein no 0.69
    10 GFF4977 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) no 0.69
    11 GFF2251 Uncharacterized protein SMc04000 no 0.68
    12 GFF690 hypothetical protein no 0.67
    13 GFF831 hypothetical protein no 0.66
    14 GFF4580 CzcABC family efflux RND transporter, membrane fusion protein no 0.66
    15 GFF4586 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) no 0.66
    16 GFF392 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) no 0.66
    17 GFF5349 Multicopper oxidase no 0.66
    18 GFF2131 Phosphoglycerate kinase (EC 2.7.2.3) no 0.65
    19 GFF2036 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.39 0.65
    20 GFF3067 hypothetical protein no 0.65

    Or look for negative cofitness