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  • Top cofit genes for GFF2020 from Sphingobium sp. HT1-2

    ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF578 hypothetical protein no 0.75
    2 GFF2885 FIG017823: ATPase, MoxR family no 0.74
    3 GFF2883 FIG042594: DUF1550 domain-containing protein no 0.69
    4 GFF2831 Alpha-glucosidase (EC 3.2.1.20) no 0.69
    5 GFF2514 hypothetical protein no 0.66
    6 GFF3032 Multicopper oxidase no 0.66
    7 GFF4703 Transcriptional regulator, LysR family no 0.66
    8 GFF713 hypothetical protein no 0.64
    9 GFF3499 hypothetical protein no 0.64
    10 GFF4528 Cell division organizing protein PopZ no 0.63
    11 GFF4850 hypothetical protein no 0.63
    12 GFF1397 hypothetical protein no 0.63
    13 GFF104 Inner membrane protein no 0.62
    14 GFF2144 hypothetical protein no 0.62
    15 GFF4154 hypothetical protein no 0.62
    16 GFF4847 Mobile element protein no 0.62
    17 GFF3053 hypothetical protein no 0.61
    18 GFF235 Phage protein (ACLAME 827) no 0.60
    19 GFF3667 hypothetical protein no 0.60
    20 GFF2048 Transcriptional regulator, MerR family no 0.60

    Or look for negative cofitness