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Cofit
Protein
Homologs
Top cofit genes for GFF2018 from
Sphingobium sp. HT1-2
Cation transport protein
SEED: Cation transport protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4496
hypothetical protein
no
0.77
2
GFF2687
putative membrane protein
no
0.74
3
GFF3315
hypothetical protein
no
0.73
4
GFF4870
putative periplasmic protein kinase ArgK and related GTPases of G3E family
no
0.70
5
GFF3930
cytosolic long-chain acyl-CoA thioester hydrolase family protein
no
0.70
6
GFF5050
Pirin
no
0.70
7
GFF2965
hypothetical protein
no
0.69
8
GFF2936
hypothetical protein
no
0.68
9
GFF3106
Homoserine O-acetyltransferase (EC 2.3.1.31)
no
0.66
10
GFF1103
hypothetical protein
no
0.66
11
GFF2474
Uncharacterized protein, similar to the N-terminal domain of Lon protease
no
0.66
12
GFF2856
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
no
0.65
13
GFF3070
hypothetical protein
no
0.65
14
GFF167
Transcriptional regulator
no
0.64
15
GFF514
hypothetical protein
no
0.64
16
GFF1773
Gene Transfer Agent tail protein
no
0.64
17
GFF3929
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
no
0.64
18
GFF1638
Nitrite-sensitive transcriptional repressor NsrR
no
0.64
19
GFF3196
hypothetical protein
no
0.63
20
GFF3730
Flagellar assembly protein FliH
no
0.63
Or look for
negative cofitness