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  • Top cofit genes for GFF2014 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1656 hypothetical protein no 0.61
    2 GFF1268 FIG022199: FAD-binding protein no 0.60
    3 GFF5123 no description no 0.55
    4 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.54
    5 GFF5409 FIG00576366: hypothetical protein no 0.53
    6 GFF4955 hypothetical protein no 0.52
    7 GFF2683 Protein containing domains DUF404, DUF407 no 0.52
    8 GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL no 0.52
    9 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.51
    10 GFF6635 FIG00441227: hypothetical protein no 0.51
    11 GFF3181 FIG005069: Hypothetical protein no 0.51
    12 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) no 0.51
    13 GFF5087 DNA repair protein RadA no 0.51
    14 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.50
    15 GFF5963 Gfa-like protein no 0.50
    16 GFF2707 hypothetical protein no 0.50
    17 GFF4483 ATP-dependent hsl protease ATP-binding subunit HslU no 0.50
    18 GFF2303 Uncharacterized DUF2909 protein BB4826 no 0.50
    19 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.50
    20 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) no 0.49

    Or look for negative cofitness