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Cofit
Protein
Homologs
Top cofit genes for GFF2013 from
Sphingobium sp. HT1-2
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1896
Metal-dependent hydrolase
no
0.72
2
GFF159
hypothetical protein
no
0.71
3
GFF1980
Flp pilus assembly protein CpaD
no
0.69
4
GFF5021
hypothetical protein
no
0.69
5
GFF736
hypothetical protein
no
0.67
6
GFF1394
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
no
0.67
7
GFF2478
hypothetical protein
no
0.66
8
GFF1454
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)
no
0.66
9
GFF3995
hypothetical protein
no
0.66
10
GFF1988
Dihydropteroate synthase (EC 2.5.1.15)
no
0.66
11
GFF344
Assimilatory nitrate reductase large subunit (EC 1.7.99.4)
no
0.65
12
GFF1670
TonB-dependent receptor
no
0.65
13
GFF1997
Acetyltransferase, GNAT family
no
0.65
14
GFF3686
Transcriptional regulator, LysR family
no
0.64
15
GFF1666
Peptidase, M20/M25/M40 family
no
0.64
16
GFF1078
Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
no
0.64
17
GFF5318
hypothetical protein
no
0.63
18
GFF1233
Transcriptional regulator, AcrR family
no
0.63
19
GFF4994
hypothetical protein
no
0.62
20
GFF3012
Amidohydrolase
no
0.62
Or look for
negative cofitness