Top cofit genes for GFF2012 from Variovorax sp. SCN45

Putative transmembrane protein
SEED: Probable transmembrane protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3789		hypothetical protein	no	0.58
2	GFF3022		ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)	no	0.57
3	GFF7243		HtrA protease/chaperone protein	no	0.57
4	GFF211		protein of unknown function UPF0125	no	0.56
5	GFF303		Probable transcriptional regulatory protein YebC	no	0.56
6	GFF4588		Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1)	no	0.55
7	GFF2447		beta-lactamase-like protein	no	0.54
8	GFF5790		putative membrane protein	no	0.54
9	GFF2626		major facilitator superfamily MFS_1	no	0.54
10	GFF288		no description	no	0.53
11	GFF2111		Permease of the drug/metabolite transporter (DMT) superfamily	no	0.52
12	GFF4571		Acyl-CoA dehydrogenase family protein	no	0.51
13	GFF4733		Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)	no	0.51
14	GFF4273		BUG/TctC family periplasmic protein	no	0.51
15	GFF1567		Demethylmenaquinone methyltransferase-like protein	no	0.51
16	GFF7080		no description	no	0.50
17	GFF5249		Protein YhfA	no	0.50
18	GFF6546		hypothetical protein	no	0.49
19	GFF5769		Chemotaxis response - phosphatase CheZ	no	0.49
20	GFF4143		Dihydrofolate reductase (EC 1.5.1.3)	0.41	0.49

Or look for negative cofitness