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Cofit
Protein
Homologs
Top cofit genes for GFF2011 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3114
Methionine ABC transporter ATP-binding protein
no
0.70
2
GFF2300
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
no
0.64
3
GFF6701
Regulatory protein, RpfE type
no
0.64
4
GFF2359
Heat-inducible transcription repressor HrcA
no
0.64
5
GFF1139
Domain of unknown function / Efflux ABC transporter, permease protein
no
0.64
6
GFF1814
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) / Allantoate amidohydrolase (EC 3.5.3.9)
no
0.63
7
GFF4944
Excinuclease ABC subunit A
no
0.63
8
GFF2304
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion
no
0.62
9
GFF6770
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
no
0.62
10
GFF4592
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.61
11
GFF275
FIG00349534: hypothetical protein
no
0.60
12
GFF1774
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
no
0.60
13
GFF2073
Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12)
no
0.60
14
GFF5823
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)
no
0.60
15
GFF3727
Transcriptional regulator, AcrR family
no
0.60
16
GFF6305
Malate synthase G (EC 2.3.3.9)
no
0.59
17
GFF3227
no description
no
0.59
18
GFF4593
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.59
19
GFF488
ATP-dependent Clp protease ATP-binding subunit ClpX
no
0.59
20
GFF2190
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
no
0.59
Or look for
negative cofitness