Top cofit genes for GFF2011 from Sphingobium sp. HT1-2

Transposase, IS110 and IS111A family
SEED: Mobile element protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5340		Phage integrase	no	0.72
2	GFF3887		Protein of unknown function UPF0060	no	0.72
3	GFF4182		hypothetical protein	no	0.68
4	GFF1013		Purine/pyrimidine phosphoribosyl transferase (EC 2.4.2.-)	no	0.68
5	GFF3711		Flagellar hook protein FlgE	no	0.66
6	GFF2272		hypothetical protein	no	0.64
7	GFF3569		hypothetical protein	no	0.64
8	GFF1037		hypothetical protein	no	0.64
9	GFF5288		hypothetical protein	no	0.62
10	GFF1478		Oxidoreductase, short-chain dehydrogenase/reductase family	no	0.62
11	GFF2		hypothetical protein	no	0.60
12	GFF3658		Tetrapartite efflux system, inner membrane component FusBC-like	no	0.60
13	GFF4684		TonB-dependent receptor	no	0.59
14	GFF2520		hypothetical protein	no	0.59
15	GFF3556		Gene Transfer Agent terminase protein	no	0.59
16	GFF2279		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	no	0.58
17	GFF2090		Transamidase GatB domain protein	no	0.58
18	GFF881		Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18)	no	0.58
19	GFF2039		RNA polymerase ECF-type sigma factor	no	0.57
20	GFF1547		Enoyl-CoA hydratase (EC 4.2.1.17)	no	0.57

Or look for negative cofitness