Top cofit genes for GFF2011 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative permease
SEED: Putative permease
KEGG: basic amino acid/polyamine antiporter, APA family

Rank Hit Name Description Conserved? Cofitness  
1 GFF261 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 0.33 0.47
2 GFF1678 Ferritin-like protein 2 no 0.46
3 GFF2529 L-galactonate dehydrogenase (EC 1.1.1.-) no 0.45
4 GFF4766 Invasion protein invH precursor no 0.43
5 GFF2848 Paraquat-inducible protein A no 0.43
6 GFF3589 Secretion system chaparone SscA no 0.43
7 GFF3555 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis no 0.42
8 GFF1063 Phosphoglycerate mutase (EC 5.4.2.1) 0.77 0.42
9 GFF1270 DNA polymerase III theta subunit (EC 2.7.7.7) no 0.42
10 GFF2056 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.76 0.42
11 GFF1983 tRNA-Arg-CCT no 0.41
12 GFF730 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) 0.38 0.41
13 GFF3097 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) no 0.41
14 GFF2580 Putative oxidoreductase YncB no 0.41
15 GFF1298 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) no 0.40
16 GFF4138 PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) no 0.40
17 GFF1759 Putative mandelate racemase STM3833 no 0.40
18 GFF3942 Propanediol dehydratase reactivation factor large subunit no 0.40
19 GFF1760 Putative permease no 0.40
20 GFF1668 Positive regulator of CheA protein activity (CheW) no 0.40

Or look for negative cofitness