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  • Top cofit genes for GFF2007 from Variovorax sp. SCN45

    Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)
    SEED: Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: fatty-acyl-CoA synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.57
    2 GFF5081 Amidohydrolase family protein no 0.56
    3 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) no 0.50
    4 GFF6934 Universal stress protein family 0.37 0.48
    5 GFF5196 L-arabinose ABC transporter, permease protein AraH no 0.48
    6 GFF4661 no description no 0.48
    7 GFF4084 hypothetical protein no 0.47
    8 GFF4571 Acyl-CoA dehydrogenase family protein 0.13 0.47
    9 GFF4534 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.45
    10 GFF1621 Phosphonoacetaldehyde dehydrogenase (NAD+) 0.29 0.45
    11 GFF4517 Uncharacterized MFS-type transporter YtbD no 0.44
    12 GFF1268 FIG022199: FAD-binding protein no 0.44
    13 GFF790 hypothetical protein 0.37 0.43
    14 GFF5920 no description no 0.42
    15 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) 0.33 0.42
    16 GFF464 Transcriptional regulator, GntR family no 0.42
    17 GFF5380 BUG/TctC family periplasmic protein no 0.42
    18 GFF4653 Cytochrome c peroxidase (EC 1.11.1.5) no 0.42
    19 GFF2492 BUG/TctC family periplasmic protein no 0.42
    20 GFF5853 Type I secretion system ATPase, LssB family LapB no 0.42

    Or look for negative cofitness