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  • Top cofit genes for GFF2005 from Sphingobium sp. HT1-2

    TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain
    SEED: TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4749 hypothetical protein no 0.80
    2 GFF3249 CzcABC family efflux RND transporter, membrane fusion protein no 0.75
    3 GFF933 hypothetical protein no 0.73
    4 GFF2594 Efflux ABC transporter, permease/ATP-binding protein no 0.73
    5 GFF750 Ribosomal silencing factor RsfA 0.56 0.72
    6 GFF3262 FeoA no 0.71
    7 GFF1433 hypothetical protein no 0.69
    8 GFF4202 hypothetical protein no 0.69
    9 GFF3413 hypothetical protein no 0.68
    10 GFF1102 Transposase no 0.68
    11 GFF2439 hypothetical protein no 0.68
    12 GFF4047 RNA polymerase ECF-type sigma factor no 0.68
    13 GFF4735 HlyD family secretion protein no 0.67
    14 GFF2599 Quinohemoprotein amine dehydrogenase alpha subunit (EC 1.4.99.-) no 0.67
    15 GFF4046 anti-FecI sigma factor FecR no 0.67
    16 GFF3483 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.67
    17 GFF5334 Putative FecR no 0.67
    18 GFF5129 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.67
    19 GFF1660 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.65
    20 GFF3830 hypothetical protein no 0.65

    Or look for negative cofitness