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  • Top cofit genes for GFF2002 from Variovorax sp. SCN45

    Thioredoxin related protein PA2694
    SEED: probable thioredoxin
    KEGG: thioredoxin 1

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2684 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.65
    2 GFF5966 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.61
    3 GFF3564 BUG/TctC family periplasmic protein no 0.56
    4 GFF5761 Flagellar motor rotation protein MotA no 0.56
    5 GFF5710 no description no 0.54
    6 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.54
    7 GFF1838 Manganese transport protein MntH no 0.54
    8 GFF7067 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.52
    9 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 no 0.52
    10 GFF1349 Thioesterase no 0.51
    11 GFF6567 hypothetical protein no 0.50
    12 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.50
    13 GFF4628 hypothetical protein no 0.50
    14 GFF6365 T6SS AAA+ chaperone ClpV (TssH) no 0.50
    15 GFF3992 HNH endonuclease family protein no 0.49
    16 GFF3581 Transcriptional regulator, ArsR family no 0.49
    17 GFF4664 hypothetical protein no 0.49
    18 GFF2596 Multidrug resistance transporter, Bcr/CflA family no 0.49
    19 GFF5709 no description no 0.48
    20 GFF870 TonB-dependent receptor no 0.48

    Or look for negative cofitness