Top cofit genes for GFF2000 from Hydrogenophaga sp. GW460-11-11-14-LB1

Uracil permease
SEED: Uracil permease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF1999		Membrane protein TerC, possibly involved in tellurium resistance	0.32	0.64
2	GFF3257		Heavy metal sensor histidine kinase	no	0.63
3	GFF5008		Tricarboxylate transport protein TctC	no	0.61
4	GFF4380		putative DNA-binding protein	no	0.61
5	GFF885		Naphthoate synthase (EC 4.1.3.36)	no	0.61
6	GFF3796		Transcriptional regulator ligR, LysR family	no	0.59
7	GFF4258		FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-)	0.39	0.58
8	GFF795		TRAP-type C4-dicarboxylate transport system, large permease component	0.56	0.56
9	GFF2869		Transcriptional regulator, IclR family	no	0.56
10	GFF2640		Single-stranded DNA-binding protein	no	0.56
11	GFF3866		Transcriptional regulator, AraC family	no	0.55
12	GFF2843		FIG00455451: hypothetical protein	no	0.55
13	GFF884		Acetoacetyl-CoA synthetase (EC 6.2.1.16)	no	0.55
14	GFF4340		hypothetical protein	no	0.55
15	GFF4032		Probable Co/Zn/Cd efflux system membrane fusion protein	no	0.55
16	GFF5821		Nitrite-sensitive transcriptional repressor NsrR	no	0.54
17	GFF2879		Two-component hybrid sensor and regulator	no	0.54
18	GFF4824		Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	0.27	0.53
19	GFF5024		Tricarboxylate transport protein TctC	no	0.53
20	GFF3802		Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)	no	0.53

Or look for negative cofitness