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  • Top cofit genes for PS417_00100 from Pseudomonas simiae WCS417

    peptidoglycan-binding protein
    SEED: Uncharacterized protein with LysM domain, COG1652

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.27
    2 PS417_00605 peptide transporter no 0.25
    3 PS417_22210 AraC family transcriptional regulator 0.56 0.24
    4 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase no 0.23
    5 PS417_24155 ATP-binding protein no 0.22
    6 PS417_00180 tryptophan synthase subunit alpha no 0.22
    7 PS417_17455 cytochrome C no 0.21
    8 PS417_20160 cysteine synthase no 0.21
    9 PS417_00260 gluconate 2-dehydrogenase no 0.20
    10 PS417_16035 ABC transporter substrate-binding protein no 0.20
    11 PS417_27040 3-phosphoglycerate dehydrogenase no 0.20
    12 PS417_28220 LysR family transcriptional regulator no 0.20
    13 PS417_27995 type IV secretion protein Rhs no 0.20
    14 PS417_02005 glutamate synthase no 0.20
    15 PS417_28410 acyl-phosphate glycerol 3-phosphate acyltransferase no 0.20
    16 PS417_00170 glucarate transporter no 0.20
    17 PS417_02000 glutamate synthase no 0.20
    18 PS417_14955 hypothetical protein no 0.19
    19 PS417_28385 membrane protein no 0.19
    20 PS417_04445 cupin no 0.19

    Or look for negative cofitness