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  • Top cofit genes for GFF1998 from Variovorax sp. SCN45

    Two-component system sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1747 FIG00799528: hypothetical protein no 0.61
    2 GFF2698 Transcriptional regulator, LysR family no 0.57
    3 GFF2186 no description no 0.56
    4 GFF3603 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) no 0.56
    5 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.56
    6 GFF5857 Fe2+-dicitrate sensor, membrane component no 0.55
    7 GFF4279 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) no 0.55
    8 GFF3489 Transcriptional regulator, AcrR family no 0.54
    9 GFF7157 Peptidase M20D, amidohydrolase no 0.54
    10 GFF2541 FIG00899427: hypothetical protein no 0.54
    11 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.53
    12 GFF4036 hypothetical protein no 0.53
    13 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.53
    14 GFF5953 Class D beta-lactamase (EC 3.5.2.6) no 0.53
    15 GFF7346 Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS no 0.52
    16 GFF5440 RNA polymerase ECF-type sigma factor no 0.52
    17 GFF2394 MotA/TolQ/ExbB proton channel family protein no 0.51
    18 GFF1849 FIG00347667: hypothetical protein no 0.49
    19 GFF225 Permeases of the major facilitator superfamily no 0.49
    20 GFF6834 no description no 0.49

    Or look for negative cofitness