Top cofit genes for GFF1994 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative amino acid permease
SEED: Putative amino acid permease

Rank Hit Name Description Conserved? Cofitness  
1 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 0.57
2 GFF2221 Nitrogen regulation protein NtrB (EC 2.7.13.3) 0.38 0.53
3 GFF2220 Nitrogen regulation protein NR(I) no 0.53
4 GFF1672 Flagellar transcriptional activator FlhC no 0.52
5 GFF1354 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) no 0.51
6 GFF2553 Osmotically inducible protein C no 0.50
7 GFF2893 'Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) @ Exopolyphosphatase (EC 3.6.1.11)' transl_table=11 0.44 0.49
8 GFF2222 Glutamine synthetase type I (EC 6.3.1.2) no 0.49
9 GFF2946 RNA polymerase sigma-54 factor RpoN no 0.49
10 GFF136 FIG002842: hypothetical protein no 0.49
11 GFF3388 Lipoprotein YcfM, part of a salvage pathway of unknown substrate no 0.49
12 GFF1082 Putative alanine/glycine transport protein 0.46 0.49
13 GFF3531 Vitamin B12 ABC transporter, ATPase component BtuD no 0.49
14 GFF3747 FIG001881: hydrolase of alkaline phosphatase superfamily no 0.48
15 GFF924 Trehalose operon transcriptional repressor no 0.48
16 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.57 0.48
17 GFF23 Methionine ABC transporter substrate-binding protein 0.36 0.48
18 GFF734 putative cytoplasmic protein no 0.47
19 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase no 0.47
20 GFF2663 Thiol peroxidase, Tpx-type (EC 1.11.1.15) no 0.47

Or look for negative cofitness