• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF1989 from Variovorax sp. SCN45

    MBL-fold metallo-hydrolase superfamily
    SEED: SoxH protein, homolog

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4153 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    2 GFF96 RNA polymerase ECF-type sigma factor no 0.51
    3 GFF647 Two-component system response regulator QseB no 0.50
    4 GFF4915 hypothetical protein no 0.48
    5 GFF5200 L-arabonate dehydratase (EC 4.2.1.25) no 0.47
    6 GFF472 hypothetical protein no 0.47
    7 GFF6461 Thioesterase superfamily no 0.47
    8 GFF3225 hypothetical protein no 0.46
    9 GFF7118 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.45
    10 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.45
    11 GFF2195 FIG00732904: hypothetical protein no 0.45
    12 GFF34 Uncharacterized metal-dependent hydrolase YcfH 0.24 0.44
    13 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.36 0.44
    14 GFF1562 Transcriptional regulator, LysR family no 0.44
    15 GFF3171 Uncharacterized protein conserved in bacteria no 0.44
    16 GFF4539 no description no 0.43
    17 GFF3866 HtrA protease/chaperone protein no 0.43
    18 GFF5527 Asl0046 protein 0.63 0.43
    19 GFF2443 Iron-sulfur cluster regulator IscR no 0.42
    20 GFF5219 2-aminoethylphosphonate ABC transporter permease protein no 0.42

    Or look for negative cofitness