Top cofit genes for GFF1987 from Variovorax sp. SCN45

Pseudouridine synthase (EC 4.2.1.70), PA2043 type
SEED: Similar to ribosomal large subunit pseudouridine synthase A

Rank Hit Name Description Conserved? Cofitness  
1 GFF1052 hypothetical protein no 0.53
2 GFF2118 hypothetical protein no 0.51
3 GFF3973 FIG01198345: hypothetical protein no 0.48
4 GFF1840 Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4) / Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4) no 0.48
5 GFF3614 UPF0056 inner membrane protein YchE no 0.44
6 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.44
7 GFF7364 no description no 0.44
8 GFF7300 Biopolymer transport protein ExbD/TolR no 0.43
9 GFF4949 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.42
10 GFF893 FIG138928: iron-regulated membrane protein no 0.42
11 GFF498 Squalene/phytoene desaturase HopC 0.38 0.42
12 GFF2318 Transcriptional regulator ArgP, LysR family 0.54 0.42
13 GFF3171 Uncharacterized protein conserved in bacteria no 0.41
14 GFF5010 Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5) no 0.41
15 GFF6024 Pyrophosphatase, MutT/nudix family (EC 3.6.1.-) 0.27 0.41
16 GFF4788 Uncharacterized protein COG3236 no 0.41
17 GFF1244 Uncharacterized protein YqjZ no 0.40
18 GFF2191 Pca operon transcriptional activator PcaQ no 0.40
19 GFF6754 no description no 0.40
20 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) no 0.40

Or look for negative cofitness