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  • Top cofit genes for GFF1985 from Variovorax sp. SCN45

    Zinc metalloprotease
    SEED: Putative predicted metal-dependent hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5422 putative membrane protein no 0.70
    2 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.22 0.63
    3 GFF1515 Flagellar hook-length control protein FliK no 0.62
    4 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.60
    5 GFF7376 Transcriptional regulator, LysR family no 0.59
    6 GFF4660 hypothetical protein no 0.59
    7 GFF3091 Septum-associated cell division protein DedD no 0.58
    8 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.58
    9 GFF2371 BUG/TctC family periplasmic protein no 0.58
    10 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) no 0.57
    11 GFF3090 Colicin V production protein no 0.57
    12 GFF7086 Transcriptional regulator, IclR family no 0.56
    13 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.55
    14 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) no 0.55
    15 GFF4657 hypothetical protein no 0.55
    16 GFF7282 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.55
    17 GFF3864 Sigma factor RpoE negative regulatory protein RseA no 0.55
    18 GFF4639 Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33) no 0.54
    19 GFF3546 Chaperone protein HtpG 0.34 0.54
    20 GFF4907 NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2) no 0.54

    Or look for negative cofitness