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  • Top cofit genes for GFF1983 from Sphingobium sp. HT1-2

    Type II/IV secretion system protein TadC, associated with Flp pilus assembly
    SEED: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
    KEGG: tight adherence protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2496 RND efflux system, membrane fusion protein 0.51 0.78
    2 GFF4307 Conjugative signal peptidase TrhF no 0.74
    3 GFF1490 Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) no 0.72
    4 GFF3107 hypothetical protein no 0.69
    5 GFF2923 hypothetical protein no 0.69
    6 GFF3714 Flagellar basal-body rod protein FlgB no 0.69
    7 GFF2628 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.23 0.68
    8 GFF2220 Organic hydroperoxide resistance protein no 0.68
    9 GFF1428 hypothetical protein no 0.68
    10 GFF1078 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) no 0.67
    11 GFF3375 hypothetical protein no 0.67
    12 GFF2881 hypothetical protein no 0.66
    13 GFF4454 Multicopper oxidase no 0.65
    14 GFF826 Cobalamin synthase (EC 2.7.8.26) no 0.65
    15 GFF1237 Transcriptional regulator, TetR family no 0.65
    16 GFF4436 hypothetical protein no 0.64
    17 GFF3720 Flagellar protein FlgJ [peptidoglycan hydrolase] no 0.64
    18 GFF4273 hypothetical protein no 0.63
    19 GFF1554 Abortive infection protein no 0.63
    20 GFF30 hypothetical protein no 0.63

    Or look for negative cofitness