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  • Top cofit genes for GFF1978 from Sphingobium sp. HT1-2

    Flp pilus assembly protein RcpC/CpaB
    SEED: Flp pilus assembly protein RcpC/CpaB
    KEGG: pilus assembly protein CpaB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1327 hypothetical protein no 0.73
    2 GFF5298 Membrane-bound lytic murein transglycosylase B no 0.72
    3 GFF2864 hypothetical protein 0.35 0.71
    4 GFF4024 hypothetical protein no 0.70
    5 GFF1238 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.67
    6 GFF1701 Cold shock protein of CSP family no 0.66
    7 GFF3315 hypothetical protein no 0.66
    8 GFF4228 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no 0.66
    9 GFF5262 Uncharacterized protein conserved in bacteria, NMA0228-like no 0.64
    10 GFF3361 Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) no 0.64
    11 GFF2671 hypothetical protein no 0.63
    12 GFF3797 hypothetical protein no 0.62
    13 GFF3633 Transcriptional regulator, LysR family no 0.62
    14 GFF4860 Transposase, IS3/IS911 family no 0.62
    15 GFF1960 Cell wall hydrolyses involved in spore germination no 0.62
    16 GFF3204 FIG003003: hypothetical protein no 0.61
    17 GFF1995 sigma-54 dependent DNA-binding response regulator no 0.60
    18 GFF547 Aspartate dehydrogenase homolog no 0.60
    19 GFF2139 hypothetical protein no 0.60
    20 GFF3723 Glucans biosynthesis glucosyltransferase H no 0.60

    Or look for negative cofitness