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  • Top cofit genes for GFF1960 from Sphingobium sp. HT1-2

    Cell wall hydrolyses involved in spore germination
    SEED: cell wall hydrolase, SleB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3733 hypothetical protein no 0.84
    2 GFF1440 hypothetical protein no 0.83
    3 GFF2922 hypothetical protein no 0.81
    4 GFF4228 dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) no 0.79
    5 GFF3109 Oxidoreductase, GMC family no 0.76
    6 GFF2395 hypothetical protein no 0.76
    7 GFF3361 Carbon monoxide dehydrogenase large chain (EC 1.2.99.2) no 0.75
    8 GFF4163 hypothetical protein no 0.75
    9 GFF2041 TonB-dependent receptor no 0.75
    10 GFF3889 hypothetical protein no 0.74
    11 GFF3777 hypothetical protein no 0.73
    12 GFF1431 FOG: TPR repeat, SEL1 subfamily no 0.73
    13 GFF2864 hypothetical protein no 0.72
    14 GFF782 TldD protein, part of TldE/TldD proteolytic complex no 0.72
    15 GFF2840 Ribosome-associated ATPase RbbA no 0.71
    16 GFF5234 HlyD-like membrane fusion protein YhiI no 0.71
    17 GFF339 FIG004694: Hypothetical protein no 0.71
    18 GFF346 Molybdenum ABC transporter ATP-binding protein ModC no 0.71
    19 GFF5009 Two-component transcriptional response regulator, LuxR family no 0.71
    20 GFF2376 Short-chain dehydrogenase no 0.70

    Or look for negative cofitness