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  • Top cofit genes for PS417_00990 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13620 thermostable hemolysin no 0.24
    2 PS417_05230 membrane protein no 0.22
    3 PS417_19950 ATP-dependent DNA helicase RecQ no 0.21
    4 PS417_04270 ribonuclease G 0.14 0.21
    5 PS417_08065 ABC transporter permease no 0.19
    6 PS417_08770 hypothetical protein no 0.18
    7 PS417_24895 hypothetical protein no 0.18
    8 PS417_25040 hypothetical protein no 0.18
    9 PS417_16980 exonuclease III 0.45 0.18
    10 PS417_15720 nitrate reductase 0.39 0.18
    11 PS417_03270 paraquat-inducible protein A 0.66 0.18
    12 PS417_09220 cupin no 0.18
    13 PS417_17595 amino acid ABC transporter permease no 0.18
    14 PS417_14955 hypothetical protein no 0.17
    15 PS417_04880 hypothetical protein no 0.17
    16 PS417_21260 hypothetical protein 0.26 0.17
    17 PS417_00170 glucarate transporter no 0.17
    18 PS417_15540 NUDIX hydrolase 0.48 0.17
    19 PS417_03265 paraquat-inducible protein A 0.28 0.17
    20 PS417_13460 peptidase no 0.17

    Or look for negative cofitness