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  • Top cofit genes for GFF1950 from Hydrogenophaga sp. GW460-11-11-14-LB1

    cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5600 putative esterase no 0.36
    2 GFF3801 Protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) no 0.31
    3 GFF2119 Sigma-fimbriae chaperone protein no 0.30
    4 GFF1354 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) no 0.30
    5 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) no 0.30
    6 GFF2123 Translation initiation factor 1 no 0.30
    7 GFF5838 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) no 0.30
    8 GFF1416 Flagellar basal-body P-ring formation protein FlgA no 0.29
    9 GFF2761 protein of unknown function DUF1501 no 0.29
    10 GFF4697 Adenylate cyclase (EC 4.6.1.1) no 0.29
    11 GFF1280 Type IV fimbrial assembly protein PilC no 0.29
    12 GFF5154 Type IV fimbrial biogenesis protein FimT no 0.28
    13 GFF4664 Type IV pilus biogenesis protein PilZ no 0.28
    14 GFF4317 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.28
    15 GFF2125 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) no 0.28
    16 GFF1503 hypothetical protein no 0.28
    17 GFF1883 hypothetical protein no 0.28
    18 GFF1814 Glutathione S-transferase (EC 2.5.1.18) no 0.28
    19 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase no 0.28
    20 GFF3462 Acyl-CoA dehydrogenase (EC 1.3.8.7) no 0.28

    Or look for negative cofitness