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Cofit
Protein
Homologs
Top cofit genes for GFF1943 from
Variovorax sp. SCN45
DNA polymerase III alpha subunit (EC 2.7.7.7)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2208
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily
no
0.55
2
GFF597
Uncharacterized MFS-type transporter
no
0.55
3
GFF5916
T6SS component TssA (ImpA)
no
0.51
4
GFF5216
Metal dependent phosphohydrolase
no
0.51
5
GFF6377
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.50
6
GFF215
RNA polymerase sigma-54 factor RpoN
no
0.49
7
GFF5123
no description
no
0.49
8
GFF6983
FIG140336: TPR domain protein
no
0.48
9
GFF4117
Translation elongation factor Tu
no
0.47
10
GFF5586
Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190)
no
0.47
11
GFF4587
Dienelactone hydrolase family protein
no
0.46
12
GFF5125
no description
no
0.46
13
GFF3418
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.46
14
GFF3777
Prolyl endopeptidase (EC 3.4.21.26)
no
0.46
15
GFF415
hypothetical protein
no
0.45
16
GFF5182
no description
no
0.45
17
GFF3357
hypothetical protein
no
0.45
18
GFF4299
3-ketoacyl-CoA thiolase
no
0.45
19
GFF196
Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-)
no
0.45
20
GFF2083
putative periplasmic membrane protein
no
0.45
Or look for
negative cofitness