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  • Top cofit genes for GFF1943 from Variovorax sp. SCN45

    DNA polymerase III alpha subunit (EC 2.7.7.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily no 0.55
    2 GFF597 Uncharacterized MFS-type transporter no 0.55
    3 GFF5916 T6SS component TssA (ImpA) no 0.51
    4 GFF5216 Metal dependent phosphohydrolase no 0.51
    5 GFF6377 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    6 GFF215 RNA polymerase sigma-54 factor RpoN no 0.49
    7 GFF5123 no description no 0.49
    8 GFF6983 FIG140336: TPR domain protein no 0.48
    9 GFF4117 Translation elongation factor Tu no 0.47
    10 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) no 0.47
    11 GFF4587 Dienelactone hydrolase family protein no 0.46
    12 GFF5125 no description no 0.46
    13 GFF3418 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.46
    14 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) no 0.46
    15 GFF415 hypothetical protein no 0.45
    16 GFF5182 no description no 0.45
    17 GFF3357 hypothetical protein no 0.45
    18 GFF4299 3-ketoacyl-CoA thiolase no 0.45
    19 GFF196 Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-) no 0.45
    20 GFF2083 putative periplasmic membrane protein no 0.45

    Or look for negative cofitness