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  • Top cofit genes for GFF194 from Sphingobium sp. HT1-2

    Conjugative transfer protein TrbF
    SEED: Conjugative transfer protein TrbF
    KEGG: type IV secretion system protein VirB5

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF824 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) no 0.66
    2 GFF4496 hypothetical protein no 0.66
    3 GFF2998 Uncharacterized protein GguC no 0.65
    4 GFF2581 hypothetical protein no 0.64
    5 GFF3070 hypothetical protein no 0.64
    6 GFF2826 hypothetical protein no 0.63
    7 GFF1757 Glutathione S-transferase (EC 2.5.1.18) no 0.63
    8 GFF4677 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family no 0.62
    9 GFF4021 hypothetical protein no 0.61
    10 GFF3593 hypothetical protein no 0.61
    11 GFF5288 hypothetical protein no 0.61
    12 GFF543 dioxygenase, TauD/TfdA family no 0.60
    13 GFF2155 hypothetical protein no 0.59
    14 GFF2213 hypothetical protein no 0.59
    15 GFF2856 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.45 0.59
    16 GFF3334 Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) no 0.59
    17 GFF5080 hypothetical protein no 0.57
    18 GFF1773 Gene Transfer Agent tail protein no 0.57
    19 GFF1555 hypothetical protein no 0.57
    20 GFF4889 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57

    Or look for negative cofitness