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Cofit
Protein
Homologs
Top cofit genes for GFF1939 from
Hydrogenophaga sp. GW460-11-11-14-LB1
Pirin
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2055
hypothetical protein
no
0.63
2
GFF4781
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.63
3
GFF1589
(Y14336) putative extracellular protein containing predicted 35aa signal peptide
no
0.59
4
GFF4077
Flagellar basal-body rod protein FlgG
no
0.59
5
GFF1056
sensory box histidine kinase/response regulator
no
0.58
6
GFF5511
Inner membrane protein CreD
0.20
0.56
7
GFF1144
putative periplasmic protein kinase ArgK and related GTPases of G3E family
no
0.56
8
GFF197
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
no
0.54
9
GFF757
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
no
0.54
10
GFF1097
3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)
no
0.54
11
GFF3733
Maebl
no
0.54
12
GFF2380
Alkaline phosphatase (EC 3.1.3.1)
no
0.53
13
GFF984
hypothetical protein
no
0.53
14
GFF1440
Flagellin protein FlaA
no
0.53
15
GFF4831
Transcriptional regulator, AraC family
no
0.52
16
GFF4963
hypothetical protein
no
0.51
17
GFF941
Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
no
0.51
18
GFF1123
Probable NreB protein
no
0.51
19
GFF5559
Topoisomerase IV subunit A (EC 5.99.1.-)
no
0.51
20
GFF5549
hypothetical protein
no
0.50
Or look for
negative cofitness