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  • Top cofit genes for GFF1930 from Variovorax sp. SCN45

    RTX toxin transporter, ATP-binding protein
    SEED: cyclolysin secretion ATP-binding protein
    KEGG: ATP-binding cassette, subfamily B, bacterial HlyB/CyaB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.62
    2 GFF4651 Kynurenine 3-monooxygenase (EC 1.14.13.9) no 0.59
    3 GFF1489 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.56
    4 GFF7121 CDP-6-deoxy-delta-3,4-glucoseen reductase-like no 0.54
    5 GFF5434 FIG097052: Sugar transporter no 0.53
    6 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.52
    7 GFF344 no description no 0.52
    8 GFF6494 protein of unknown function DUF1232 no 0.52
    9 GFF3956 no description no 0.52
    10 GFF3007 hypothetical protein no 0.52
    11 GFF2546 sodium-solute symporter, putative 0.35 0.51
    12 GFF3772 Arginase (EC 3.5.3.1) no 0.51
    13 GFF1257 Organosulfonate utilization protein SsuF no 0.51
    14 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.50
    15 GFF7328 no description no 0.50
    16 GFF5721 Flagellar L-ring protein FlgH 0.50 0.50
    17 GFF7156 hypothetical protein no 0.49
    18 GFF6958 no description no 0.49
    19 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.49
    20 GFF4824 Transcriptional regulator, AraC family no 0.49

    Or look for negative cofitness