Top cofit genes for GFF1929 from Variovorax sp. SCN45

Transcriptional regulator, AraC family

Rank Hit Name Description Conserved? Cofitness  
1 GFF4008 Transcriptional regulator, LysR family no 0.53
2 GFF5290 hypothetical protein no 0.50
3 GFF4788 Uncharacterized protein COG3236 no 0.50
4 GFF2630 Ligand-binding SRPBCC domain protein family no 0.48
5 GFF7066 Two-component transcriptional response regulator receiver domain 0.25 0.48
6 GFF163 no description no 0.48
7 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.48
8 GFF1133 FIG00431745: hypothetical protein no 0.48
9 GFF2232 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) no 0.47
10 GFF2432 Fe2+-dicitrate sensor, membrane component no 0.47
11 GFF3061 BUG/TctC family periplasmic protein no 0.47
12 GFF6521 Auxin efflux carrier family protein no 0.46
13 GFF5240 General secretion pathway protein K no 0.46
14 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) no 0.46
15 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) no 0.46
16 GFF5215 Efflux ABC transporter, permease/ATP-binding protein no 0.46
17 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.45
18 GFF2605 Tricarboxylate transport sensor protein TctE no 0.45
19 GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains no 0.44
20 GFF5804 FIG00978734: hypothetical protein no 0.44

Or look for negative cofitness