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  • Top cofit genes for GFF1925 from Variovorax sp. SCN45

    Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1885 Gluconate transporter family protein 0.16 0.61
    2 GFF6203 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.60
    3 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.55
    4 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) no 0.53
    5 GFF4854 Electron transfer flavoprotein, alpha subunit no 0.53
    6 GFF7181 no description no 0.53
    7 GFF2625 hypothetical protein no 0.52
    8 GFF6644 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.50
    9 GFF3145 Two-component system response regulator QseB no 0.50
    10 GFF908 Putative oxidoreductase 0.30 0.50
    11 GFF4104 Cystathionine beta-lyase (EC 4.4.1.8) no 0.49
    12 GFF5743 Flagellar motor switch protein FliM no 0.49
    13 GFF418 Endonuclease III (EC 4.2.99.18) no 0.49
    14 GFF1648 Ligand-binding SRPBCC domain protein family no 0.49
    15 GFF1714 no description no 0.49
    16 GFF5764 hypothetical protein no 0.48
    17 GFF813 Transcriptional regulator PA0877, LysR family no 0.48
    18 GFF6568 hypothetical protein no 0.48
    19 GFF3226 no description no 0.48
    20 GFF2316 FIG015547: peptidase, M16 family 0.57 0.48

    Or look for negative cofitness