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  • Top cofit genes for GFF1923 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.60
    2 GFF7256 Dehydratase, IlvD/Edd family no 0.58
    3 GFF2665 FIG001454: Transglutaminase-like enzymes, putative cysteine proteases no 0.56
    4 GFF1868 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.55
    5 GFF1513 Cytochrome c551/c552 no 0.55
    6 GFF1037 putative membrane protein no 0.54
    7 GFF655 hypothetical protein no 0.54
    8 GFF7262 no description no 0.52
    9 GFF834 hypothetical protein no 0.52
    10 GFF588 putative membrane protein no 0.52
    11 GFF4127 Dibenzothiophene desulfurization enzyme B no 0.51
    12 GFF1375 Transcriptional regulator, LysR family no 0.51
    13 GFF6603 Glycosidases no 0.51
    14 GFF88 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.50
    15 GFF745 BUG/TctC family periplasmic protein no 0.50
    16 GFF2784 Peptidase, M20/M25/M40 family no 0.50
    17 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.50
    18 GFF6425 no description no 0.49
    19 GFF6937 Membrane protein no 0.49
    20 GFF2011 hypothetical protein no 0.49

    Or look for negative cofitness