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  • Top cofit genes for GFF1922 from Variovorax sp. SCN45

    Acyl-CoA dehydrogenase
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6254 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.57
    2 GFF6992 Flagellum-specific ATP synthase FliI no 0.55
    3 GFF3709 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.54
    4 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.52
    5 GFF2034 BUG/TctC family periplasmic protein no 0.52
    6 GFF1552 Phosphate regulon transcriptional regulatory protein PhoB (SphR) no 0.52
    7 GFF4650 Transcriptional regulator, PadR family no 0.51
    8 GFF510 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    9 GFF3001 Metal chaperone, involved in Zn homeostasis no 0.50
    10 GFF1087 Thioredoxin reductase (EC 1.8.1.9) no 0.50
    11 GFF3329 Terpene utilization protein AtuA no 0.49
    12 GFF6452 Putative diheme cytochrome c-553 no 0.49
    13 GFF4023 no description no 0.48
    14 GFF1315 Cyclic di-GMP-binding protein BcsB no 0.48
    15 GFF3605 Esterase/lipase no 0.48
    16 GFF7182 no description no 0.47
    17 GFF6683 Efflux ABC transporter, permease protein no 0.47
    18 GFF138 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein 0.15 0.47
    19 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) 0.22 0.47
    20 GFF3523 hypothetical protein no 0.46

    Or look for negative cofitness