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  • Top cofit genes for GFF1921 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3313 Response regulator CreB of two-component signal transduction system CreBC no 0.57
    2 GFF3866 HtrA protease/chaperone protein no 0.52
    3 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.52
    4 GFF95 hypothetical protein no 0.50
    5 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 no 0.50
    6 GFF5957 Uncharacterized MFS-type transporter no 0.49
    7 GFF5870 hypothetical protein no 0.49
    8 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.48
    9 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.48
    10 GFF1757 hypothetical protein no 0.47
    11 GFF4687 no description no 0.47
    12 GFF3385 Flavin-containing monooxygenase no 0.47
    13 GFF6890 Threonine efflux protein no 0.46
    14 GFF1218 O-antigen acetylase no 0.45
    15 GFF6106 Dienelactone hydrolase family protein no 0.45
    16 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.44
    17 GFF318 Uncharacterized protein YjgR 0.37 0.43
    18 GFF3709 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.43
    19 GFF2653 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) no 0.43
    20 GFF3438 Amidohydrolase family protein no 0.42

    Or look for negative cofitness