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  • Top cofit genes for GFF1920 from Variovorax sp. SCN45

    Cysteine dioxygenase (EC 1.13.11.20)
    SEED: Cysteine dioxygenase (EC 1.13.11.20)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1455 DNA polymerase II (EC 2.7.7.7) no 0.70
    2 GFF6613 no description no 0.69
    3 GFF4822 Thiamine pyrophosphate-requiring enzymes no 0.60
    4 GFF4716 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.60
    5 GFF4882 putative plasmid stabilization protein no 0.59
    6 GFF1379 Uncharacterized MFS-type transporter no 0.59
    7 GFF1769 Urease accessory protein UreD no 0.56
    8 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.56
    9 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.56
    10 GFF1678 Transcriptional regulator, GntR family no 0.55
    11 GFF5525 FIG00933173: hypothetical protein no 0.54
    12 GFF40 no description no 0.54
    13 GFF6867 no description no 0.53
    14 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.53
    15 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.52
    16 GFF3575 no description no 0.52
    17 GFF4058 Copper/silver efflux RND transporter, outer membrane protein CusC 0.68 0.51
    18 GFF1566 no description no 0.51
    19 GFF6227 hypothetical protein no 0.51
    20 GFF1625 Transcriptional regulator, LysR family no 0.51

    Or look for negative cofitness