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  • Top cofit genes for GFF192 from Sphingobium sp. HT1-2

    Conjugative transfer protein TrbJ
    SEED: Conjugative transfer protein TrbJ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4680 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.84
    2 GFF447 N-methylhydantoinase A (EC 3.5.2.14) no 0.82
    3 GFF4053 hypothetical protein no 0.82
    4 GFF244 Prolyl endopeptidase (EC 3.4.21.26) no 0.82
    5 GFF326 hypothetical protein no 0.81
    6 GFF5337 two-component system, response regulator no 0.80
    7 GFF4083 FIG01094649: hypothetical protein no 0.78
    8 GFF4656 hypothetical protein no 0.78
    9 GFF3409 hypothetical protein no 0.78
    10 GFF3925 hypothetical protein no 0.77
    11 GFF4791 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.76
    12 GFF513 hypothetical protein no 0.76
    13 GFF4026 hypothetical protein no 0.75
    14 GFF1265 Glycosyl transferase, family 2 no 0.75
    15 GFF2387 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) no 0.75
    16 GFF4732 hypothetical protein no 0.75
    17 GFF3950 RND efflux system, membrane fusion protein no 0.75
    18 GFF2884 FIG037995: Hypothetical protein no 0.74
    19 GFF3506 ABC-type antimicrobial peptide transport system, ATPase component no 0.74
    20 GFF1842 hypothetical protein no 0.74

    Or look for negative cofitness