• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_09775 from Pseudomonas simiae WCS417

    DeoR faimly transcriptional regulator
    SEED: Diaminopimelate epimerase (EC 5.1.1.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03025 penicillin-binding protein 1C no 0.22
    2 PS417_05155 DNA polymerase III subunit chi no 0.20
    3 PS417_04935 hypothetical protein no 0.20
    4 PS417_26190 sarcosine oxidase subunit beta 0.52 0.19
    5 PS417_18760 hypothetical protein no 0.18
    6 PS417_18860 transcriptional regulator no 0.17
    7 PS417_02065 membrane protein 0.49 0.17
    8 PS417_03215 8-oxoguanine deaminase no 0.17
    9 PS417_00100 peptidoglycan-binding protein no 0.17
    10 PS417_27410 outer membrane usher protein no 0.17
    11 PS417_09885 hypothetical protein no 0.17
    12 PS417_04025 glycine/betaine ABC transporter permease no 0.17
    13 PS417_05795 lysozyme 0.55 0.16
    14 PS417_05785 tail protein no 0.16
    15 PS417_12840 TetR family transcriptional regulator no 0.16
    16 PS417_06880 RNA polymerase sigma factor no 0.16
    17 PS417_22070 long-chain fatty acid--CoA ligase 0.49 0.16
    18 PS417_24200 GCN5 family acetyltransferase no 0.16
    19 PS417_16960 fimbrial protein no 0.16
    20 PS417_15850 alcohol dehydrogenase no 0.16

    Or look for negative cofitness