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  • Top cofit genes for GFF1913 from Variovorax sp. SCN45

    Short-chain dehydrogenase
    SEED: short chain dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3151 no description no 0.52
    2 GFF6482 Transcriptional regulator, AcrR family no 0.48
    3 GFF6336 no description no 0.48
    4 GFF6662 hypothetical protein no 0.47
    5 GFF2892 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    6 GFF752 hypothetical protein no 0.47
    7 GFF4119 no description no 0.46
    8 GFF77 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.46
    9 GFF4322 Acyl-CoA dehydrogenase no 0.46
    10 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.46
    11 GFF3928 Histone acetyltransferase HPA2 and related acetyltransferases no 0.45
    12 GFF3731 Glutathione S-transferase no 0.45
    13 GFF3472 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.44
    14 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.44
    15 GFF2587 hypothetical protein no 0.43
    16 GFF1577 hypothetical protein no 0.43
    17 GFF2720 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.43
    18 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.42
    19 GFF1294 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.42
    20 GFF2422 Polysaccharide deacetylase no 0.42

    Or look for negative cofitness