Top cofit genes for GFF1912 from Variovorax sp. SCN45

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF1485 Transcriptional regulator, AraC family no 0.60
2 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.57
3 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl no 0.56
4 GFF3532 Two-component system response regulator QseB no 0.55
5 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) 0.51 0.52
6 GFF6221 T6SS associated component TagF (ImpM) no 0.51
7 GFF4469 Cell division protein FtsA no 0.50
8 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.49
9 GFF202 Transcriptional regulator, LysR family no 0.48
10 GFF1703 DNA for 3-methylaspartate ammonia-lyase, glutamate mutase no 0.48
11 GFF5068 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.47
12 GFF4414 Conjugative transfer protein TrbB no 0.47
13 GFF6140 Uncharacterized MFS-type transporter Saci_1521 no 0.47
14 GFF6018 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase no 0.47
15 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.47
16 GFF1748 Outer membrane lipoprotein no 0.47
17 GFF5703 pyridoxal-phosphate dependent enzyme family protein no 0.47
18 GFF5596 Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) no 0.47
19 GFF3376 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.46
20 GFF5924 FOG: HEAT repeat no 0.46

Or look for negative cofitness