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  • Top cofit genes for GFF191 from Variovorax sp. SCN45

    (Y14336) putative extracellular protein containing predicted 35aa signal peptide
    SEED: (Y14336) putative extracellular protein containing predicted 35aa signal peptide

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1857 FIG00553873: hypothetical protein no 0.55
    2 GFF5528 Conjugative transfer protein TrbL no 0.53
    3 GFF2106 hypothetical protein no 0.51
    4 GFF4718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    5 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR no 0.51
    6 GFF1745 Acyl-CoA dehydrogenase no 0.50
    7 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    8 GFF7342 Oxidoreductase no 0.48
    9 GFF6834 no description no 0.48
    10 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) no 0.47
    11 GFF4283 Putative transposase InsK for insertion sequence element IS150 no 0.47
    12 GFF2357 DNA repair protein RecN no 0.47
    13 GFF6547 Glutathione S-transferase (EC 2.5.1.18) 0.36 0.47
    14 GFF844 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.47
    15 GFF891 Gfa-like protein no 0.47
    16 GFF6633 hypothetical protein no 0.46
    17 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) no 0.46
    18 GFF6328 LPS-assembly lipoprotein LptE no 0.46
    19 GFF3367 Septum site-determining protein MinC 0.27 0.46
    20 GFF2171 MBL-fold metallohydrolase SPO0683 no 0.46

    Or look for negative cofitness