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  • Top cofit genes for GFF1908 from Variovorax sp. SCN45

    Short-chain dehydrogenases of various substrate specificities
    SEED: Short-chain dehydrogenases of various substrate specificities

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2749 hypothetical protein no 0.53
    2 GFF3975 Metal-dependent hydrolase no 0.53
    3 GFF2366 Tricarboxylate transport protein TctC no 0.50
    4 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    5 GFF373 Probable transmembrane protein no 0.49
    6 GFF3277 Membrane protein insertion efficiency factor YidD no 0.48
    7 GFF3267 RNA-binding protein no 0.48
    8 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.47 0.48
    9 GFF6374 predicted 2-keto-3-deoxyxylonate dehydratase no 0.48
    10 GFF2807 Glyoxalase family protein 0.31 0.48
    11 GFF78 Cytochrome c family protein no 0.47
    12 GFF2822 Periplasmic hemin-binding protein 0.31 0.47
    13 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.47
    14 GFF606 BUG/TctC family periplasmic protein no 0.45
    15 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.16 0.45
    16 GFF7321 Sensor histidine kinase GlrK no 0.45
    17 GFF4448 FIG01212157: hypothetical protein no 0.44
    18 GFF3013 KEGG: type VI secretion system secreted protein Hcp no 0.44
    19 GFF5071 AmpG permease no 0.44
    20 GFF624 hypothetical protein no 0.44

    Or look for negative cofitness