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  • Top cofit genes for GFF1904 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1419 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.62
    2 GFF3584 hypothetical protein no 0.58
    3 GFF6507 no description no 0.55
    4 GFF6328 LPS-assembly lipoprotein LptE no 0.54
    5 GFF6833 FIG00432169: hypothetical protein no 0.53
    6 GFF162 hypothetical protein no 0.53
    7 GFF5367 GTP cyclohydrolase 1 type 2 homolog YbgI 0.25 0.53
    8 GFF5739 Flagellar biosynthesis protein FliQ no 0.53
    9 GFF1679 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) no 0.52
    10 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein 0.45 0.52
    11 GFF4131 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    12 GFF1063 dioxygenase, TauD/TfdA family no 0.52
    13 GFF310 FIG025233: SAM-dependent methyltransferases no 0.52
    14 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein no 0.52
    15 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.51
    16 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) no 0.51
    17 GFF5127 no description no 0.50
    18 GFF1737 Carbon starvation protein A no 0.50
    19 GFF5669 hypothetical protein no 0.49
    20 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.49

    Or look for negative cofitness