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  • Top cofit genes for GFF190 from Variovorax sp. SCN45

    Ankyrin
    SEED: Ankyrin

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1792 Transcriptional regulator, IclR family no 0.64
    2 GFF6087 Transcriptional regulator, AcrR family no 0.64
    3 GFF189 Negative transcriptional regulator no 0.61
    4 GFF5849 FIG01210206: hypothetical protein no 0.60
    5 GFF6410 Histidine utilization repressor 0.47 0.60
    6 GFF216 Transmembrane regulator protein PrtR no 0.59
    7 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.59
    8 GFF502 Hydrolase no 0.59
    9 GFF2137 Ribose operon repressor no 0.58
    10 GFF741 Transcriptional regulator, LysR family no 0.57
    11 GFF4413 CopG domain-containing protein no 0.56
    12 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) no 0.56
    13 GFF1841 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) 0.34 0.55
    14 GFF1891 Transcriptional regulator, GntR family no 0.55
    15 GFF1324 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) no 0.55
    16 GFF2866 Uncharacterized MFS-type transporter no 0.55
    17 GFF412 Transcription-repair coupling factor no 0.55
    18 GFF5666 Prevent host death protein, Phd antitoxin no 0.55
    19 GFF2539 FAD/FMN-containing dehydrogenases no 0.54
    20 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.54

    Or look for negative cofitness