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  • Top cofit genes for PS417_09655 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11760 Fis family transcriptional regulator no 0.23
    2 PS417_09645 TonB-dependent receptor no 0.22
    3 PS417_05140 dipicolinate synthase no 0.20
    4 PS417_27080 penicillin amidase no 0.20
    5 PS417_19635 lipid kinase no 0.20
    6 PS417_06095 energy transducer TonB no 0.20
    7 PS417_18220 phenylacetaldoxime dehydratase no 0.20
    8 PS417_17445 sulfur oxidation protein SoxZ no 0.19
    9 PS417_23580 peptidylprolyl isomerase no 0.19
    10 PS417_00930 ABC transporter permease no 0.19
    11 PS417_02860 TonB-dependent receptor 0.35 0.19
    12 PS417_03930 thymidine phosphorylase no 0.19
    13 PS417_05000 TonB-dependent receptor no 0.18
    14 PS417_00470 glutamate:protein symporter no 0.18
    15 PS417_07095 histidine kinase no 0.18
    16 PS417_20585 chemotaxis protein no 0.18
    17 PS417_04925 MFS transporter no 0.18
    18 PS417_23205 transcriptional regulator no 0.18
    19 PS417_18115 gamma-glutamyltransferase no 0.18
    20 PS417_12180 ABC transporter substrate-binding protein no 0.18

    Or look for negative cofitness