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Cofit
Protein
Homologs
Top cofit genes for GFF1896 from
Variovorax sp. SCN45
Two-component transcriptional response regulator, LuxR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF99
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.61
2
GFF4926
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
no
0.57
3
GFF4822
Thiamine pyrophosphate-requiring enzymes
no
0.54
4
GFF5239
hypothetical protein
no
0.53
5
GFF3574
hypothetical protein
no
0.53
6
GFF2427
Transcriptional regulator, MarR family
no
0.51
7
GFF881
Transcriptional regulator ligR, LysR family
no
0.50
8
GFF2074
hypothetical protein
no
0.50
9
GFF2161
Dihydroorotase (EC 3.5.2.3)
no
0.49
10
GFF6317
hypothetical protein
no
0.49
11
GFF3997
Short-chain dehydrogenase/reductase SDR
no
0.47
12
GFF4554
Protease HtpX
no
0.47
13
GFF1329
Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12)
no
0.47
14
GFF2107
no description
no
0.47
15
GFF6771
2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
no
0.46
16
GFF4168
ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
no
0.46
17
GFF4283
Putative transposase InsK for insertion sequence element IS150
no
0.45
18
GFF6623
Esterase/lipase
no
0.45
19
GFF3704
FIG00536957: hypothetical protein
no
0.44
20
GFF1326
Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)
no
0.44
Or look for
negative cofitness