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  • Top cofit genes for GFF1896 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.61
    2 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.57
    3 GFF4822 Thiamine pyrophosphate-requiring enzymes no 0.54
    4 GFF5239 hypothetical protein no 0.53
    5 GFF3574 hypothetical protein no 0.53
    6 GFF2427 Transcriptional regulator, MarR family no 0.51
    7 GFF881 Transcriptional regulator ligR, LysR family no 0.50
    8 GFF2074 hypothetical protein no 0.50
    9 GFF2161 Dihydroorotase (EC 3.5.2.3) no 0.49
    10 GFF6317 hypothetical protein no 0.49
    11 GFF3997 Short-chain dehydrogenase/reductase SDR no 0.47
    12 GFF4554 Protease HtpX no 0.47
    13 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.47
    14 GFF2107 no description no 0.47
    15 GFF6771 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) no 0.46
    16 GFF4168 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.46
    17 GFF4283 Putative transposase InsK for insertion sequence element IS150 no 0.45
    18 GFF6623 Esterase/lipase no 0.45
    19 GFF3704 FIG00536957: hypothetical protein no 0.44
    20 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) no 0.44

    Or look for negative cofitness