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  • Top cofit genes for PS417_09640 from Pseudomonas simiae WCS417

    capsular biosynthesis protein
    SEED: Extracellular Matrix protein PslA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09620 lipopolysaccharide biosynthesis protein 0.84 0.51
    2 PS417_16160 ABC transporter substrate-binding protein no 0.49
    3 PS417_07615 TetR family transcriptional regulator 0.43 0.48
    4 PS417_09635 mannose-1-phosphate guanylyltransferase 0.83 0.48
    5 PS417_06365 RNA polymerase sigma factor 0.75 0.47
    6 PS417_09630 glycosyl transferase 0.85 0.46
    7 PS417_16370 chemotaxis protein CheY 0.82 0.45
    8 PS417_10720 chemotaxis protein CheY 0.83 0.45
    9 PS417_19560 amino acid ABC transporter substrate-binding protein 0.42 0.44
    10 PS417_12550 chemotaxis protein no 0.41
    11 PS417_24595 histidine kinase 0.57 0.40
    12 PS417_05980 chemotaxis protein CheA 0.22 0.39
    13 PS417_28265 pyridoxamine kinase 0.58 0.39
    14 PS417_27605 hypothetical protein 0.30 0.38
    15 PS417_10645 magnesium ABC transporter ATPase no 0.37
    16 PS417_27505 transcriptional regulator 0.79 0.36
    17 PS417_24885 transcriptional regulator no 0.36
    18 PS417_09625 sugar ABC transporter substrate-binding protein 0.73 0.36
    19 PS417_09665 dimethylglycine dehydrogenase no 0.35
    20 PS417_13940 racemase no 0.35

    Or look for negative cofitness