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  • Top cofit genes for GFF1893 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    LysR family transcriptional regulator lrhA
    SEED: LysR family transcriptional regulator lrhA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3697 Phage excisionase no 0.60
    2 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) 0.46 0.56
    3 GFF4091 FIG034929: Fimbriae usher protein SafC no 0.55
    4 GFF1503 Lipoprotein nlpI precursor 0.63 0.55
    5 GFF4036 tRNA-Ser-CGA no 0.53
    6 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) no 0.50
    7 GFF469 putative fimbrial protein precursor no 0.49
    8 GFF3992 Outer membrane protein C precursor no 0.49
    9 GFF1209 putative outer membrane protein no 0.48
    10 GFF4273 Putative outer membrane lipoprotein 0.56 0.48
    11 GFF1207 Probable regulatory protein no 0.48
    12 GFF2558 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 0.39 0.48
    13 GFF4428 Allantoinase (EC 3.5.2.5) no 0.48
    14 GFF1618 FIG00923183: possible membrane protein YebY no 0.47
    15 GFF3919 secreted effector protein no 0.47
    16 GFF2979 VapC toxin protein no 0.47
    17 GFF4649 Cyd operon protein YbgE no 0.47
    18 GFF4573 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 0.27 0.47
    19 GFF3696 Integrase no 0.47
    20 GFF1212 Kappa-fimbriae usher protein no 0.47

    Or look for negative cofitness