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  • Top cofit genes for PS417_09630 from Pseudomonas simiae WCS417

    glycosyl transferase
    SEED: O antigen biosynthesis rhamnosyltransferase rfbN (EC 2.4.1.-)
    KEGG: rhamnosyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09620 lipopolysaccharide biosynthesis protein 0.94 0.57
    2 PS417_09635 mannose-1-phosphate guanylyltransferase 0.92 0.56
    3 PS417_09640 capsular biosynthesis protein 0.85 0.46
    4 PS417_10645 magnesium ABC transporter ATPase no 0.45
    5 PS417_09625 sugar ABC transporter substrate-binding protein 0.89 0.42
    6 PS417_09615 glycosyl transferase family 1 0.51 0.39
    7 PS417_07615 TetR family transcriptional regulator no 0.39
    8 PS417_27605 hypothetical protein no 0.39
    9 PS417_03990 ligand-gated channel protein no 0.38
    10 PS417_27785 phosphoglucomutase 0.68 0.37
    11 PS417_26775 thiazole synthase 0.83 0.34
    12 PS417_06365 RNA polymerase sigma factor no 0.33
    13 PS417_27810 ribonuclease PH no 0.33
    14 PS417_00655 DSBA oxidoreductase no 0.33
    15 PS417_06775 antibiotic transporter no 0.33
    16 PS417_09600 glycosyl transferase family 1 0.96 0.32
    17 PS417_09585 acetyltransferase 0.85 0.32
    18 PS417_09645 TonB-dependent receptor no 0.32
    19 PS417_09590 membrane protein 0.27 0.32
    20 PS417_21105 aminodeoxychorismate synthase 0.81 0.32

    Or look for negative cofitness