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  • Top cofit genes for GFF1888 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2244 hypothetical protein no 0.56
    2 GFF4157 hypothetical protein no 0.55
    3 GFF916 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) no 0.54
    4 GFF5024 hypothetical protein no 0.50
    5 GFF632 Urea ABC transporter, ATPase protein UrtE no 0.50
    6 GFF1513 Cytochrome c551/c552 no 0.50
    7 GFF4278 Putative short-chain dehydrogenase no 0.50
    8 GFF3120 no description no 0.48
    9 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.47
    10 GFF4682 Transcriptional regulator, MerR family no 0.47
    11 GFF6834 no description no 0.47
    12 GFF3423 Adenylate cyclase (EC 4.6.1.1) no 0.47
    13 GFF5453 Alkaline phosphatase (EC 3.1.3.1) no 0.46
    14 GFF1020 hypothetical protein no 0.46
    15 GFF5579 probable bifunctional hydroxylase/oxidoreductase no 0.46
    16 GFF4719 hypothetical protein no 0.46
    17 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) no 0.46
    18 GFF4199 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.45
    19 GFF5583 Transcriptional regulator PA0181, LysR family no 0.45
    20 GFF1698 BUG/TctC family periplasmic protein no 0.44

    Or look for negative cofitness