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  • Top cofit genes for GFF1884 from Variovorax sp. SCN45

    Gluconokinase (EC 2.7.1.12)
    SEED: Gluconokinase (EC 2.7.1.12)
    KEGG: shikimate kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.51
    2 GFF1400 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.48
    3 GFF5273 Various polyols ABC transporter, permease protein 1 no 0.47
    4 GFF5286 Ferrichrome-iron receptor 0.15 0.47
    5 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) no 0.46
    6 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.46
    7 GFF4883 Translation-disabling ACNase RloC no 0.46
    8 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.44
    9 GFF6620 no description no 0.43
    10 GFF7411 no description no 0.42
    11 GFF4633 no description no 0.41
    12 GFF2730 DNA topoisomerase IV subunit A (EC 5.99.1.3) no 0.41
    13 GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) 0.41 0.41
    14 GFF6988 Flagellar hook protein FlgE no 0.41
    15 GFF1857 FIG00553873: hypothetical protein no 0.41
    16 GFF5069 BUG/TctC family periplasmic protein no 0.41
    17 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.41
    18 GFF1317 no description no 0.41
    19 GFF4769 Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system no 0.40
    20 GFF5664 hypothetical protein no 0.39

    Or look for negative cofitness