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  • Top cofit genes for GFF1876 from Variovorax sp. SCN45

    Dihydrodipicolinate synthase family
    SEED: 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
    KEGG: dihydrodipicolinate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3831 Acetyltransferase, GNAT family no 0.62
    2 GFF2219 FIG00454641: hypothetical protein no 0.55
    3 GFF3267 RNA-binding protein no 0.54
    4 GFF5006 Uncharacterized deacetylase no 0.54
    5 GFF4871 FIG00457034: hypothetical protein no 0.54
    6 GFF7000 Flagellar L-ring protein FlgH no 0.54
    7 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.53
    8 GFF3872 DNA recombination and repair protein RecO no 0.53
    9 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.52
    10 GFF7201 Alkanesulfonates transport system permease protein no 0.52
    11 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.51
    12 GFF4674 Amidohydrolase family protein no 0.51
    13 GFF1435 BUG/TctC family periplasmic protein no 0.50
    14 GFF1340 ABC transporter, ATP-binding protein 1 RSc1753 no 0.50
    15 GFF6641 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.50
    16 GFF3133 hypothetical protein no 0.50
    17 GFF650 Response regulator no 0.50
    18 GFF4036 hypothetical protein no 0.50
    19 GFF731 Transcriptional regulator, ArsR family no 0.49
    20 GFF170 Two-component system sensor histidine kinase/response regulator hybrid 0.63 0.49

    Or look for negative cofitness